BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G09LP1|AL427671
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1057 1775 0.0
>3x_Contig1057
Length = 3069
Score = 1775 bits (880), Expect = 0.0
Identities = 954/994 (95%), Gaps = 1/994 (0%)
Strand = Plus / Minus
Query: 9 atttagaagaacttcaaggtgccgatctgcaagaaattrcatttgctaaattgcaacaag 68
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1187 atttagaagaacttcaaggtgccgatctgcaagaaattgcccttgctaaattgcaacaag 1128
Query: 69 wkgttaacgcattggggtttggtagaycagtgttcgtcgaggatactgtwttctcattcg 128
|| ||||||||||| |||||| ||||||||||||||||||||| |||||||||
Sbjct: 1127 cggtccacgcattggggcccggtagaccagtgttcgtcgaggatactgcactctcattcg 1068
Query: 129 acgaattcaatgggttgcmaggwgcgtacatcaaatggttcatcaaatcgatggggcttg 188
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1067 acgaattcaatgggttgccaggtgcgtacatcaaatggttcatcaaatcgatggggcttg 1008
Query: 189 cmaaagtcgtgaaaatkctcgatttatttkwkaataaaggcgcatacgcgatmactacga 248
| |||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||
Sbjct: 1007 ccaaagtcgtgaaaatgctcgattcattcgagaataaaggcgcatacgcgatcactacga 948
Query: 249 tmgcatacgctgactctaagggccaattacacgtattcmaaggtaagamtcacggaacca 308
| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 947 tcgcatacgctgactctaagggccaattacacgtattccaaggtaagactcacggaacca 888
Query: 309 tcgttgacagtagaggtcacaccaatttcggttgggattccatcttcmaaccggatgaat 368
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 887 tcgttgacagtagaggtcacaccaatttcggttgggattccatcttccaaccggatgaat 828
Query: 369 camaaaamaacgaaacgtatgcmgaaatggctaaagaagaaaagaacaaaatctctmagc 428
|| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||| |||
Sbjct: 827 cacaaaacaacgaaacgtatgccgaaatggctaaagaagacaagaacaaaatctctcagc 768
Query: 429 gtggcagagcattcgcccaattgaaagaatatctatacaacactggtatataagaatagt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 767 gtggcagagcattcgcccaattgaaagaatatctatacaacactggtatataagactagt 708
Query: 489 aagtatatmmtgtgtatgagtcaactccagactatgagtaactaactgcmtgtmgctgga 548
|||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 707 aagtatatcctgtgtatgagtcaactccagactatgagtaactaactgcctgtcgctgga 648
Query: 549 attcaaatatcgttaccctactctcttatgtactgaaaaattttgatgagcatctaagca 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 attcaaatatcgttaccctactctcttatgtactgaaaaattttgatgagcatctaagca 588
Query: 609 tttccaatgttaacacaattcaagaatacacattgacagatcaacaaggcgagaaattga 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tttccaatgttaacacaattcaagaatacacattgacagatcaacaaggcgagaaattga 528
Query: 669 actgtaaaacactgattaaggactcaggatcccagcggcaagagtgtatagagcccggga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 actgtaaaacactgattaaggactcaggatcccagcggcaagagtgtatagagcccggga 468
Query: 729 gtatagattcagagggagtactgagaagaaagcgttctgttttatctgttttactttctt 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtatagattcagagggagtactgagaagaaagcgttctgttttatctgttttactttctt 408
Query: 789 ttgtgttaaacatacaagtttcattagagaacggaaattcaaacgatatatatagagttc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttgtgttaaacatacaagtttcattagagaacggaaattcaaacgatatatatagagttc 348
Query: 849 ggttttggatccgctcagtggcaagccagggggacaaggacttagtatttatttgaaatt 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggttttggatccgctcagtggcaagccagggggacaaggacttagtatttatttgaaatt 288
Query: 909 cagaagaagaagaagaagaagaagaaggtatgtcacatatccagcaggcggtcgatattg 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cagaagaagaagaagaagaagaagaaggtatgtcacatatccagcaggcggtcgatattg 228
Query: 969 ccaattcttcta-cgctggaaatgatttgargaa 1001
|||||||||||| ||||||||||||||||| |||
Sbjct: 227 ccaattcttctaccgctggaaatgatttgaagaa 194
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9342
Number of Sequences: 1807
Number of extensions: 9342
Number of successful extensions: 658
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)